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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7288995 chr22:26668175 A/C SF3A1 chr22:30727977-30752936:- 0.5 6.2 1.23E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C SLC25A17 chr22:41165634-41215403:- 0.62 6.35 4.9E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C SMARCB1 chr22:24129150-24176703:+ 0.61 5.89 7.1E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C SMCR7L chr22:39896105-39914136:+ 0.51 5.89 7.31E-9 Box Plot
THCA rs7288995 chr22:26668175 A/C ST13 chr22:41220539-41253026:- 0.64 6.82 2.7E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C TAB1 chr22:39795746-39833065:+ 0.67 6.24 9.87E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C THOC5 chr22:29901868-29951205:- 0.52 6.41 3.53E-10 Box Plot
THCA rs7288995 chr22:26668175 A/C TOM1 chr22:35695268-35743987:+ 0.68 6.66 7.76E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C TOMM22 chr22:39077953-39081426:+ 0.75 8.11 4.31E-15 Box Plot
THCA rs7288995 chr22:26668175 A/C TUBGCP6 chr22:50656118-50683421:- 0.5 6.71 5.67E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C TUG1 chr22:31366663-31375381:+ 0.63 6.88 1.94E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C TXN2 chr22:36863083-36878077:- 0.67 7.93 1.52E-14 Box Plot
THCA rs7288995 chr22:26668175 A/C UBE2L3 chr22:21903736-21978323:+ 0.63 6.85 2.23E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C XRCC6 chr22:42017123-42060052:+ 0.64 6.87 2.03E-11 Box Plot
THCA rs7288995 chr22:26668175 A/C ZC3H7B chr22:41697526-41756151:+ 0.66 6.64 8.72E-11 Box Plot